Insertion junction: CLIP2.073421_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073421
Chromosome:chromosome 10
Location:1246949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426550 (1 of 1) IPR003347//IPR006917 - JmjC domain // SOUL haem-binding protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGTGAGTCTAAGCCTGTAAGAAGGGTGTTTGGAAGCTGCTTTTACA
Internal bar code:AGCGCCGTAGGTGTTCGAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGATATAGCCGCACCT
Suggested primer 2:CGACTTTGAGCTGTTGCACC