Insertion junction: CLIP2.073433_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073433
Chromosome:chromosome 17
Location:5622540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739950 (1 of 1) PF01612//PF13086//PF13087 - 3'-5' exonuclease (DNA_pol_A_exo1) // AAA domain (AAA_11) // AAA domain (AAA_12) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGCGGCGGCAGCAGGACCTGGATTTTCGCATGTGTAGGCCCGGCCTT
Internal bar code:GTTGGCGTTGTGTATGTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1718
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCGTCAAAAAGTTGCAT
Suggested primer 2:TGCACATGACAACAAGCGTG