Insertion junction: CLIP2.073466_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073466
Chromosome:plastome
Location:26800
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802276 ChreCp014,2717057,rpl16 (1 of 1) PTHR12220//PTHR12220:SF14 - 50S/60S RIBOSOMAL PROTEIN L16 // SUBFAMILY NOT NAMED; 50S ribosomal protein L16 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTTTCCTCTTAAATGACCACGGTGTGGTTTACGGAATTTTGTTCTTT
Internal bar code:CTCTATGCCTTCCCGTTACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:34.2466
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAACGCTGCCAAAGGAG
Suggested primer 2:AGGGCAGCCTTGATGAGAAA