Insertion junction: CLIP2.073476_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073476
Chromosome:chromosome 2
Location:6353196
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g387850 RWP13 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAAACTGGCAGGCGCGCTCGCGCTCCCTTACCTGCAAAGATGCTATG
Internal bar code:CCTTTTGCTCCGATATAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAATGGGTGGGGACGTTG
Suggested primer 2:CCGCCGTAGCCGTCATTATA