Insertion junction: CLIP2.073491_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073491
Chromosome:chromosome 9
Location:5070028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406050 DIV64,PYR7 (1 of 1) 6.3.4.2 - CTP synthase (glutamine hydrolyzing) / UTP--ammonia ligase; CTP synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTACAGGGACATCCGGGCCTAAGCCGCCTAACCATTACAACGTTATTC
Internal bar code:ACTGCTAGTTAACGTACTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGAGTGTGATGGCTAGA
Suggested primer 2:AGAGGAGGCAGATCAGACGT