Insertion junction: CLIP2.073497_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073497
Chromosome:chromosome 16
Location:4713573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677702 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGCAAGTATGACCACCAGCCCACGACGGGCGACTCTTGCCCTCCCCG
Internal bar code:CAGTCACCAGTGGGCTTTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4503
LEAP-Seq percent confirming:59.3496
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGATGTAGTCGGGCTC
Suggested primer 2:TCAATGCAACGGGCTAGGTT