Insertion junction: CLIP2.073498_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073498
Chromosome:chromosome 13
Location:2573129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580550 HLM20 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); putative N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCACTCCTGGCTTCCACCCTCAGGCTTCCGTTGCCACCTGGCCGCA
Internal bar code:TTAAAGCATAGTCAAATTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATTCCCTGGGGTGTGTG
Suggested primer 2:AGGCGTTGTTAAGTCGTCGT