Insertion junction: CLIP2.073501_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073501
Chromosome:chromosome 13
Location:4291020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592300 (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAGACATTTCTCCGCCTTCGGTGGACTAGGGGCAGATTTCTACAGCC
Internal bar code:ACCAGACTCCCTTGCATACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4755
LEAP-Seq percent confirming:97.6923
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGCTGTAAATGGGTGGA
Suggested primer 2:TTAGCACAAAAGCACACGCC