Insertion junction: CLIP2.073503_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073503
Chromosome:chromosome 9
Location:3329750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395399 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTAGGGGTGCAGTAGGGGGTGCAAGGCCGGGAATGGTGCAGCAGCAG
Internal bar code:CGGTGGCTTGCCTGCAGGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1331
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTGTCACGGAGTCACG
Suggested primer 2:CGAGTATGAGGACGACGTGG