Insertion junction: CLIP2.073506_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073506
Chromosome:chromosome 7
Location:3695581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337700 PDC1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGCTTGCACGACGCCACATGCAGCAACATTAGCAGCAACGAGGGAG
Internal bar code:ATCGAGACCGCAATGGCATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGCATTGCCCGCTATC
Suggested primer 2:CTACCACGCGTACGGTGTAC