Insertion junction: CLIP2.073524_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073524
Chromosome:chromosome 12
Location:4350658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519180 EFT1a,PSRP7,EFT1 Chloroplast elongation factor Ts-like protein; (1 of 1) K02357 - elongation factor Ts (tsf, TSFM) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGCCGAGGCACACGGAAGACCGGCAGCCGCGTGCCTTGACCGTCCG
Internal bar code:CGCAGTGCAGTTTAAGTATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCGGTGTGTAGGTCTGG
Suggested primer 2:GACTTGAACTCGACGGTGGT