Insertion junction: CLIP2.073525_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073525
Chromosome:chromosome 12
Location:800866
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g492200 (1 of 6) 3.4.22.69 - SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACAGGCTGTGTCGCTGTGTGACGCGCCGCCCGGGCTGAAG
Internal bar code:GGCACTTCATACAGCGTCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGCCCCTGTTTGTATC
Suggested primer 2:CGCCCACTCACATACACACT