Insertion junction: CLIP2.073535_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073535
Chromosome:chromosome 11
Location:4299834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482450 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAGAGGACGAGTGAGCGGGCACACAACTACTGAGGGGGTGGTGGCGG
Internal bar code:ACAATATGAGTGAGTGGTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2966
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCATCTCTCCACTTGCT
Suggested primer 2:TCGCCTTTTGCCTTTTGACG