Insertion junction: CLIP2.073536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073536
Chromosome:chromosome 16
Location:4973973
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g686350 (1 of 1) IPR000738//IPR009068 - WHEP-TRS domain // S15/NS1, RNA-binding 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCACACCGCCTCATGCCCACCCATCACCACCTCACCACGCACCCACGG
Internal bar code:CGGCCGGTACAGGAACTCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGTCGTAGGACTGTGG
Suggested primer 2:GGCTCGTGCTGATATGACGA