Insertion junction: CLIP2.073539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073539
Chromosome:chromosome 13
Location:5163180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607200 CYG42 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAAACCTTCATCACGTTGGTACTGCGATCTCTTCCTCTCTGGCGTTT
Internal bar code:CGATTTAGTCGTGGGAAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2404
LEAP-Seq percent confirming:51.6129
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCATGCATAACTGGCG
Suggested primer 2:ACCGCCTGTACCTCTCATCT