Insertion junction: CLIP2.073543_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073543
Chromosome:chromosome 16
Location:2704832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661850 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGAGCTACATAGAGTGCGCTGTAGATGAGCAGATGAGTGTGGGCAT
Internal bar code:CAGTCAAACGGAAGCACATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3057
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTGATCATAGCGTCGG
Suggested primer 2:CCGCCGAGATTGAGGACTAC