Insertion junction: CLIP2.073545_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073545
Chromosome:chromosome 7
Location:101767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312800 (1 of 18) PF12906 - RING-variant domain (RINGv) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGTTAGTGATGTCAGGGGAGGCAGCTGCATCCCGGGTACTCCGTCA
Internal bar code:AGACTCGGCAAGCGTATTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1992
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AATCTCTGTGTCGCTGTGCA
Suggested primer 2:CTCTTCCTCTTCCTCGTCGC