Insertion junction: CLIP2.073547_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073547
Chromosome:chromosome 14
Location:1757738
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g619200 (1 of 140) IPR002048 - EF-hand domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCCAGAGATAGGCCGCCGCCGCTGGCGAGAAGGGCCCTCAGCCTCTG
Internal bar code:CTTGCCCTAAGGAACTATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:98
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCACTTGTAGCAGCAG
Suggested primer 2:GCGCTCGATTGGTGATTGTC