Insertion junction: CLIP2.073550_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073550
Chromosome:chromosome 7
Location:5935675
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g354250 PGK2 (1 of 2) PF00162 - Phosphoglycerate kinase (PGK); Phosphoglycerate kinase 3'UTR
Cre07.g354301 RDP1 Putative rhodanese domain phosphatase; (1 of 3) K18065 - Cdc25 family phosphatase [EC:3.1.3.48 1.20.4.-] (CDC25) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGTGTGGGACCAGCCTGGCCTGACCCGGGTTGGCACATGGCCTTGGG
Internal bar code:GGAATTTGTGTGGGGCGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGAGCTGGAGGTAGGTA
Suggested primer 2:CCACGGGTATCCTCGAATGG