Insertion junction: CLIP2.073561_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073561
Chromosome:chromosome 13
Location:5106304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606850 (1 of 1) K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGACTCCTCTTAACGAGCGCTGTCACACTGTGCCACCGGTGGTCCAGC
Internal bar code:TACTCGGTTGAGGCTAAATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGAAGGGAATGTGCTGG
Suggested primer 2:CCGTTGCATTACGCTAGTGC