Insertion junction: CLIP2.073567_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073567
Chromosome:chromosome 3
Location:8838564
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g800411 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTCGCTAGCCCCGCTACGGGGGCTGCCACCGTCACGGCCGAGGTCGC
Internal bar code:CCACTTCCAAGATGTAGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1355
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCAGTGGCTTCTCCTGG
Suggested primer 2:GAGCTAGCCACCAAGTCAGG