Insertion junction: CLIP2.073578_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073578
Chromosome:chromosome 4
Location:2774370
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g223700 (1 of 2) K07735 - putative transcriptional regulator (algH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGGGGGGAACGGGGGCCGGGGGAGGTATGGGGTCGGACAGATAGAC
Internal bar code:CGAGGTAATTAGTGGAAAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:16.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTGGGGGTGATGGGAGG
Suggested primer 2:AGCCAGAGTAAAAGCGTGCT