Insertion junction: CLIP2.073590_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073590
Chromosome:chromosome 12
Location:7885246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553500 ANK15 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCCTGTTAATATGTTCTTATGTATGTTACAGTTGCAAGCCCAGCTG
Internal bar code:GCAACGAGGGGAACTAAGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAAAACAACACGCACGCC
Suggested primer 2:CACAGCTTGGAGTTGTTGCC