Insertion junction: CLIP2.073596_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073596
Chromosome:chromosome 1
Location:1402845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGCCAGAGGTTATCGGCAGCGGCCCTGGGTGGGGGGGAGTAGGCGAG
Internal bar code:GCTAAGCGGTTGTTCGTATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3076
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAGCGCAGAACCCTAGT
Suggested primer 2:GCAGAAGTAACCACCAGCCT