Insertion junction: CLIP2.073598_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073598
Chromosome:chromosome 6
Location:5258883
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g284300 (1 of 7) IPR000048//IPR027417 - IQ motif, EF-hand binding site // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCAAAGAAATGTAGGCGCCATCACCCTTGAGGCGCCATTGACTCCT
Internal bar code:AATCCTCATCGTTCTAGGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:677
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGCTCT
Suggested primer 2:TATCCTCGTTTGTGGGTGCC