Insertion junction: CLIP2.073602_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073602
Chromosome:chromosome 8
Location:116509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358531 (1 of 10) PF03798 - TLC domain (TRAM_LAG1_CLN8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAACACACAGACCGGGGATATCCCGGGATTCCCGCCCTGCTCCCCTC
Internal bar code:TGGTCCTCATTGTTAGATGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:533
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAAGCATCTCTCCCCGA
Suggested primer 2:ACGACACTGAGCTCACTGTG