Insertion junction: CLIP2.073603_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073603
Chromosome:chromosome 1
Location:7745999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGATCGCCAGTTTACGGGTTATCCTGGATGAGGCACGAGGCGTGTGG
Internal bar code:AAAGCTTGACAGGGAATCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2577
LEAP-Seq percent confirming:89.0411
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAAGTTTGGCACCAGTG
Suggested primer 2:TTCGTTGTCTTCCTCAGCCC