Insertion junction: CLIP2.073609_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073609
Chromosome:chromosome 16
Location:1487133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652900 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCTACTTTTGGTCCAGTGCAACGACAAGTATTCGGCTAGTGCAAAAT
Internal bar code:TACTATTACGGACCCGTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2709
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCAAACAGCTTGCCAC
Suggested primer 2:AAGATGCGAGCTCTGCTTGT