Insertion junction: CLIP2.073615_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073615
Chromosome:chromosome 10
Location:6177955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462700 (1 of 1) K14397 - cleavage and polyadenylation specificity factor subunit 5 (NUDT21, CPSF5, CFIM25) 3'UTR
Cre10.g462750 (1 of 1) K11374 - elongator complex protein 2 (ELP2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTACCTCTCTGCTCCTCTTGGTTCCTCCTCCACACACCCCGCAACCC
Internal bar code:CCTTAGCAAATGCCGGCAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:833
LEAP-Seq percent confirming:23.913
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGACCTGCACGACAACC
Suggested primer 2:CCCAGGCAAGAGGAGAAAGG