Insertion junction: CLIP2.073616_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073616
Chromosome:chromosome 10
Location:5455178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457500 CKIN beta,SNRKB1 regulatory subunit beta of snRK1 complex in Chlamydomonas; (1 of 1) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCTGGCATCGTAGGCAGCAGATACTCTAGCAGCGGCCCCCTGGCCGC
Internal bar code:CCTCAGCTTGGTCAGTGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:157
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:157

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAGCCGGACACTTGTGGG
Suggested primer 2:CATAGGGGCGGTCCATACAC