Insertion junction: CLIP2.073616_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073616
Chromosome:chromosome 10
Location:5455185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457500 CKIN beta,SNRKB1 regulatory subunit beta of snRK1 complex in Chlamydomonas; (1 of 1) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGGCGGCGGCAGCTTGCCGCAGCAGGCGTCGCCTCCGCCCCCGATG
Internal bar code:CCTCAGCTTGGTCAGTGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1979
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGGGGCGGTCCATACAC
Suggested primer 2:ATAAGCCGGACACTTGTGGG