Insertion junction: CLIP2.073620_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073620
Chromosome:chromosome 6
Location:6770095
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g800726 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCGCCCCAGCCTCCCAGCCCGGCCCCACCTGTGTGCACAGCTGACAC
Internal bar code:AATCAAACTGTTCCCTCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:37.0968
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGCCAGAACTTGTTGC
Suggested primer 2:TACTCCTCCCTTACCCCAGC