Insertion junction: CLIP2.073624_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073624
Chromosome:chromosome 17
Location:4572862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731800 (1 of 2) PTHR10913 - FOLLISTATIN-RELATED 5'UTR
Cre17.g731850 SDR29 Short-chain dehydrogenase/reductase; (1 of 1) 1.3.1.34 - 2,4-dienoyl-CoA reductase (NADPH) / 4-enoyl-CoA reductase (NADPH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCCCAGTTCCCTTTTGCAGCGCTTGACCTTAACACAGCATGCCGTAG
Internal bar code:AGCACAACAGTTCAGACGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2830
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTTCACGGTGCAAGTTC
Suggested primer 2:ACCCGATGCAAAAGAGGGAG