Insertion junction: CLIP2.073646_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073646
Chromosome:chromosome 15
Location:1216215
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre15.g801719 NCL59 Nuclear Control of chloroplast-Like 59; (1 of 5) IPR013584//IPR016024 - RAP domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCTGGAGCACTAGTATACCTACTGCCTAAGTCATGTCCACTCGCTG
Internal bar code:CGACGTCTTTTAGGAAGTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2705
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACGAGGTGCAGCATG
Suggested primer 2:GTTGTTGGCGTTGTCAGTCC