Insertion junction: CLIP2.073655_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073655
Chromosome:chromosome 3
Location:1171172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149300 (1 of 1) 2.8.4.5 - tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase / Methylthio-threonylcarbamoyl-adenosine transferase B 3'UTR
Cre03.g149350 RWP4 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCGCCTACGCTCCTCCAAGCACCCACGCCCCCGTACTTCCGCATTA
Internal bar code:TTTTCGCAGACAGGTTCTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2962
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGAACGGTTGGCTTGG
Suggested primer 2:ATCTGCAACACCCCCATCAG