Insertion junction: CLIP2.073660_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073660
Chromosome:chromosome 12
Location:4252312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518200 PDI1,DNJ3 (1 of 1) PTHR18929//PTHR18929:SF103//PTHR24078//PTHR24078:SF252 - PROTEIN DISULFIDE ISOMERASE // PROTEIN DISULFIDE-ISOMERASE A5 // DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; Protein disulfide isomerase, DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGGGTTTGGCATCGCTGGCATAGGTGCATTTCAGGGGTAGCTTGGCT
Internal bar code:GGGGATGGGTACTGGATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3864
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTGCCTTTGTAACACA
Suggested primer 2:GACAGTGGCAAGGCAAGTTG