Insertion junction: CLIP2.073660_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073660
Chromosome:chromosome 12
Location:4252318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518200 PDI1,DNJ3 (1 of 1) PTHR18929//PTHR18929:SF103//PTHR24078//PTHR24078:SF252 - PROTEIN DISULFIDE ISOMERASE // PROTEIN DISULFIDE-ISOMERASE A5 // DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; Protein disulfide isomerase, DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCGGCCTGCGCCCGCAACACCACAACTGCCTGCCATTCCTGCACGG
Internal bar code:GGGGATGGGTACTGGATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGTGGCAAGGCAAGTTG
Suggested primer 2:GCGCTTGCCTTTGTAACACA