Insertion junction: CLIP2.073669_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073669
Chromosome:chromosome 12
Location:2680920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505200 HEL51 (1 of 1) K14777 - ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13] (DDX47, RRP3); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGGGAATACCAGCAGGGCAACCGTGAACCGTGTGGCTGGTACTCAGG
Internal bar code:CCCCCGTGTCCCTACTGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5672
LEAP-Seq percent confirming:67.3469
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATACATCCGTGCTCCGT
Suggested primer 2:GCATTTGTTTGCGGTCCCTT