Insertion junction: CLIP2.073676_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073676
Chromosome:chromosome 14
Location:1757575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619200 (1 of 140) IPR002048 - EF-hand domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGGGTAGGTCGCGTGGGTAGGTCAAGGGTGTCGCCCTTACACGCA
Internal bar code:TTTTATAGCACGTTAACGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4402
LEAP-Seq percent confirming:75.4491
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:167

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTCGATTGGTGATTGTC
Suggested primer 2:GGCCGTGTTCGCATGTTATC