Insertion junction: CLIP2.073680_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073680
Chromosome:chromosome 17
Location:4714414
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g732900 (1 of 1) IPR000104//IPR001126 - Antifreeze protein, type I // UmuC domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGGCGCCGCGCCAGCCGTCCCCGGCGCAGCAGCCGGTGGTCCCAGC
Internal bar code:GATACGGTTGGTGAAGGCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATATACACTGGGCGGGTCC
Suggested primer 2:AGAGCTACACAACCACCAGC