Insertion junction: CLIP2.073682_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073682
Chromosome:chromosome 1
Location:7604765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053288 (1 of 1) K01974 - RNA 3'-terminal phosphate cyclase (ATP) (RTCA, rtcA) 5'UTR
Cre01.g053300 AIH1 Agmatine iminohydrolase; (1 of 2) 3.5.3.12 - Agmatine deiminase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGTCCAAGCGAGTATATCAAGTGCGTTCCGATGATATAAAGTAGTG
Internal bar code:GCACGTTCTCGTTTAGGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATTTGAAAGCGTGTGT
Suggested primer 2:GAGAGGGAAACGGAAAGGGG