Insertion junction: CLIP2.073688_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073688
Chromosome:chromosome 9
Location:6336759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414250 ALG8,GTR20 (1 of 1) 2.4.1.265 - Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol alpha-1,3- glucosyltransferase / Dol-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-Dol alpha-1->3-glucosyltransferase; Alpha-1%252C3-glucosyltransferase 8 outside_mRNA
Cre09.g414300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCATGATGCGTGCAGTCCGTGATCAGCGCGTGAGCGCCTATGCGTA
Internal bar code:TGGCGATTACGAGAGGTGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCACCCCCATTGAGTTC
Suggested primer 2:CTGTACTGCTCTGTGGTGCA