Insertion junction: CLIP2.073691_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073691
Chromosome:chromosome 12
Location:4701181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522650 (1 of 2) 2.4.1.232 - Initiation-specific alpha-1,6-mannosyltransferase / Glycolipid 6-alpha-mannosyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGTGCCTATGTCCCCCTGCGTTCCTCGTGGGCTTCTTTGCATTTCC
Internal bar code:GACTGTGGAGAGATAGTGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1416
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGCTAAGTTGGCACATC
Suggested primer 2:ATGATGTTCCTTGGGGCTGG