Insertion junction: CLIP2.073693_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073693
Chromosome:chromosome 16
Location:4425406
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g668250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGAGCTGCACGGAGCACTAGCAGGGGCCTCGCAGCCGCCACTGCGTGC
Internal bar code:ACGCGATTCTGCTCTGAAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACGGTGACACGCACTT
Suggested primer 2:TCCCACAACCATCTGACACG