Insertion junction: CLIP2.073696_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073696
Chromosome:chromosome 12
Location:2448315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467716 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATATTGCCAGCAGGCTTGAAAATATGCGTGGTACTGACCTGAGGCTTT
Internal bar code:GGTGGGGCCAGATGAATATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:57.4468
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTGGGAGGGGATTGTG
Suggested primer 2:GGTCATCCCACAGAAAGGGG