Insertion junction: CLIP2.073711_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073711
Chromosome:chromosome 1
Location:1634474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008850 HLM2 (1 of 1) PF12931//PF12932 - Sec23-binding domain of Sec16 (Sec16_C) // Vesicle coat trafficking protein Sec16 mid-region (Sec16); Histone-lysine N-methyltransferase 5'UTR
Cre01.g008891 (1 of 2) 2.8.1.1//2.8.1.2 - Thiosulfate sulfurtransferase / Thiosulfate thiotransferase // 3-mercaptopyruvate sulfurtransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCGAGATTGGCGACGTAATTCACCCGCAAGATAACACAGAATGCGT
Internal bar code:TGATATAATCCCTGACGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCATCCTCGTCATCGTC
Suggested primer 2:CGATAGTGGTGATGACGGGG