Insertion junction: CLIP2.073715_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073715
Chromosome:chromosome 13
Location:1413344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572000 TPM1,UPM2,SUMT2,COBA Putative tetrapyrrole methylase; (1 of 1) 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGGCATTTGGAGAGACTCTTGGCAGCGCTGCATGGCATGAAACGCGA
Internal bar code:ACAAACCGGTCCAGCCCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1581
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGCGGTATCTCTGAAG
Suggested primer 2:GGGAGAGTGCAAGGCTGAAT