Insertion junction: CLIP2.073715_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073715
Chromosome:chromosome 13
Location:1413356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572000 TPM1,UPM2,SUMT2,COBA Putative tetrapyrrole methylase; (1 of 1) 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGCCAAATTATATATAAAAGTCATAGTGCCGGATTTTTATGCCGCC
Internal bar code:TGCGAAGTCGAGATAAGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1805
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGAGTGCAAGGCTGAAT
Suggested primer 2:ATGCGGCGGTATCTCTGAAG