Insertion junction: CLIP2.073722_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073722
Chromosome:chromosome 14
Location:2323716
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g622900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGCAGCGCCTTCATCGCGTCGCCGCCCACAGCCTGCACGCTACGGG
Internal bar code:TTCTGGATCGTTGGAGTCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCTGTGTGATTGTCCGT
Suggested primer 2:CATGGACGGCTATCCCATCC