Insertion junction: CLIP2.073738_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073738
Chromosome:chromosome 14
Location:194770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801597 3'UTR
Cre14.g801598 (1 of 3) 3.5.5.1 - Nitrilase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGATGAGGCAGACGCTTGCGGCCTCAGACTAGAGACGTGGCGTGGGC
Internal bar code:ATGCACTAGAAAATCTGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACACCAGATGGAAAGGA
Suggested primer 2:GACTGCATACGTGGCGGATA